Home » PANDA » PandaRoot » Bugs, Fixes, Releases » New release of external packages
| New release of external packages [message #5196] |
Thu, 11 October 2007 15:03  |
Florian Uhlig
Messages: 424
Registered: May 2007
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first-grade participant |
From: *gsi.de
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Hi
As discussed in the yersterdays meeting i installed the new
release of the external packages here at GSI and build also
a tar file.
Versions:
ROOT : 5.16.00
GEANT3 : 1.8
GEANT4 : 4.9
CLHEP : 2.0.3.1
Pythia : 6.4.09
Pluto : 4.12
VGM : 2.09
GEANT4_VMC: 2.3
New packages:
GEANT4 data files
Part of Mona Lisa (Monitoring)
CMake (For external installations wich don't have CMake installed)
At GSI you find the new installation at
/misc/cbmsoft/Debian3.1/development for 32bit machines and
/misc/cbmsoft/Debian64/development for 64bit machines
To use the new installation you must set the SIMPATH pointing
to one of these directories. Before you run cmake again you should remove the file CMakeCache.txt in your build directory
because otherwise you may end up with a strange configuration.
If you want to install the external packages on your local installation get the file with
wget http://cbmroot.gsi.de/download/cbmsoft_devel.111007.tar.gz
untar the file, enter the directory cbmsoft and execute the
shell script
./configure_full.sh
I hope the menues, which are new, are self-explanatory.
The default values should be gcc in the first menue, debug in the second menu and Directory in the last one. If you don't know what to do or you're as lazy as i am run the script with the parameter
automatic which sets everything automatic.
./configure_full.sh automatic
I hope this is enough information. If something is missing or you have comments, questions etc. please post in the forum.
Have a lot of fun with the new installation.
Ciao
Florian
[Updated on: Thu, 11 October 2007 15:21] Report message to a moderator |
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| Re: New release of external packages [message #5205 is a reply to message #5196] |
Sat, 13 October 2007 18:33  |
Johan Messchendorp
Messages: 693
Registered: April 2007
Location: University of Groningen
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first-grade participant |
From: *xs4all.nl
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Hi,
A problem which I encounter with the new external packages. I try to run the "sim_emc.C" macro with "TGeant4" transport model. The result is, however, a floating-point exception after the second event (see dump below). Any idea, what the cause is?
Johan.
### Run 0 start.
-I CbmPrimaryGenerator: 1 primary tracks from vertex (0, 0, 0)
>>> Event 0
>>> End of Event 0
-I CbmPrimaryGenerator: 1 primary tracks from vertex (0, 0, 0)
>>> Event 1
>>> End of Event 1
-I CbmPrimaryGenerator: 1 primary tracks from vertex (0, 0, 0)
>>> Event 2
*** Break *** floating point exception
Using host libthread_db library "/lib/tls/libthread_db.so.1".
Attaching to program: /proc/30488/exe, process 30488
`system-supplied DSO at 0xffffe000' has disappeared; keeping its symbols.
[Thread debugging using libthread_db enabled]
[New Thread 1447467584 (LWP 30488)]
0x563b03ae in waitpid () from /lib/tls/libc.so.6
#1 0x56345d12 in system () from /lib/tls/libc.so.6
#2 0x563028af in system () from /lib/tls/libpthread.so.0
#3 0x5573aedf in TUnixSystem::Exec () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#4 0x5573b383 in TUnixSystem::StackTrace () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#5 0x55738c9c in TUnixSystem::DispatchSignals () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#6 0x55736a78 in SigHandler () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#7 0x5573e3ce in sighandler () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#8 <signal handler called>
#9 0x566ac13b in TGeoScaledShape::DistFromInside () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libGeom.so
#10 0x5668701a in TGeoNavigator::FindNextBoundary () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libGeom.so
#11 0x5667113b in TGeoManager::FindNextBoundary () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libGeom.so
#12 0x5c13573e in TG4RootNavigator::ComputeStep () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libG4root.so
#13 0x5a8bff3b in G4Transportation::AlongStepGetPhysicalInteractionLength ()
from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 transportation.so
#14 0x5bbcc641 in G4SteppingManager::DefinePhysicalStepLength () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 tracking.so
#15 0x5bbce852 in G4SteppingManager::Stepping () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 tracking.so
#16 0x5bbd4dd3 in G4TrackingManager::ProcessOneTrack () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 tracking.so
#17 0x5bc373e2 in G4EventManager::DoProcessing () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 event.so
#18 0x5bc3807d in G4EventManager::ProcessOneEvent () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 event.so
#19 0x5bcc2675 in G4RunManager::DoEventLoop () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 run.so
#20 0x5bcc1cc1 in G4RunManager::BeamOn () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4/lib/Linux-g++/libG4 run.so
#21 0x5c205a5b in TG4RunManager::ProcessRun () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/l ibgeant4vmc.so
#22 0x5c20c8d9 in TGeant4::ProcessRun () from /home/rugkvi04/kvi/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/l ibgeant4vmc.so
#23 0x59f644c2 in CbmMCApplication::RunMC (this=0x858bb10, nofEvents=10) at /home/rugkvi04/kvi/fairroot_jgm/cbmsoft/pandaroot/base/CbmMCApplication. cxx:193
#24 0x59f75b7f in CbmRunSim::Run (this=0x84b0da0, NStart=10, NStop=0) at /home/rugkvi04/kvi/fairroot_jgm/cbmsoft/pandaroot/base/CbmRunSim.cxx:141
#25 0x59fa05de in G__CbmDict_519_0_5 (result7=0xfffe0180, funcname=0x84af960 "\001", libp=0xfffda3d0, hash=0)
at /home/rugkvi04/kvi/fairroot_jgm/cbmsoft/buildPanda/base/CbmDict.cxx:8229
#26 0x55c91f76 in Cint::G__ExceptionWrapper () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#27 0x55d5fc0a in G__call_cppfunc () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#28 0x55d4c68d in G__interpret_func () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#29 0x55d2cf52 in G__getfunction () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#30 0x55de14aa in G__getstructmem () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#31 0x55dd8d56 in G__getvariable () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#32 0x55d2298b in G__getitem () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#33 0x55d12c66 in G__getexpr () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#34 0x55d7f058 in G__exec_function () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#35 0x55d87608 in G__exec_statement () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#36 0x55d4a152 in G__interpret_func () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#37 0x55d2e5a7 in G__getfunction () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#38 0x55d22ec8 in G__getitem () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#39 0x55d12c66 in G__getexpr () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#40 0x55d11b00 in G__calc_internal () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#41 0x55d93699 in G__process_cmd () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#42 0x5570958b in TCint::ProcessLine () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#43 0x5570972a in TCint::ProcessLineSynch () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#44 0x5566f99c in TApplication::ProcessFile () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#45 0x5566f084 in TApplication::ProcessLine () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#46 0x561e63c6 in TRint::Run () from /home/rugkvi04/kvi/fairroot/cbmsoft/tools/root/lib/libRint.so.5.16
#47 0x08048e2e in main ()
Johan Messchendorp
University of Groningen/KVI
Zernikelaan 25
NL-9747 AA Groningen
The Netherlands
tel. +31-503633558
fax +31-503634003
[Updated on: Sat, 13 October 2007 18:33] Report message to a moderator |
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| Re: New release of external packages [message #5223 is a reply to message #5221] |
Tue, 16 October 2007 11:25 |
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Anonymous Poster
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From: *ikp.kfa-juelich.de
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Hello Florian,
I am also trying currently to install the PANDARoot external packages in Jülich. As for Stefano everything are running smoothly until the compilation of Geant4_vmc is started. At this point the compilation stops with the error message:
<command line>:1:1: warning: "__GNUC_MINOR__" redefined
<built-in>:1:1: warning: this is the location of the previous definition
/usr/local/panda/fairroot/cbmsoft/transport/geant4_vmc_2.3/source/../tmp /tgt_linux/geant4Cint.cxx
/usr/local/panda/fairroot/cbmsoft/transport/geant4_vmc_2.3/source/../tmp /tgt_linux/geant4Cint.cxx:29:30: error: TCollectionProxy.h: No such file or directory
make: *** [/usr/local/panda/fairroot/cbmsoft/transport/geant4_vmc_2.3/source/../tm p/tgt_linux//usr/local/panda/fairroot/cbmsoft/transport/geant4_vmc_2.3/s ource/../tmp/tgt_linux/geant4Cint.o] Error 1
*** ERROR: Geant4_VMC could not be created.
*** End installation of external packages with Errors***
This problem is known. In the ROOT 5.16 the class TCollectionProxy is renamed to TCollectionProxyFactory which cause this problem. There is no good solution yet, one have to use some trick as described here
I am cyrrently trying to do this.
Andrey
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| Re: New release of external packages [message #5230 is a reply to message #5225] |
Wed, 17 October 2007 11:52 |
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Anonymous Poster
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From: *ikp.kfa-juelich.de
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Hi Florian!
| Florian Uhlig wrote on Tue, 16 October 2007 15:17 |
As i said before. I installed the stuff on serveral machines here
at GSI and during the Panda Gridworkshop on several other machines without any problems, so i don't understand what's going
on. Which version of gcc did you use?
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Let me explain it in greater details. I am using gcc 4.0.2, but I think that it isn't the problem of a compiler but the VMC itself. During the compilation the file geant4Cint.cxx in the tmp/tgt_linux is created. In my case (probably in the Dima's case also) it contains in the line 29 the following statement:
#include "TCollectionProxy.h"
The problem is that since the Root v5.16 this class is renamed to TCollectionProxyFactory.h. Of course the compiler can't find this include and quit with an error message.
I have a look at the GSI installation. In GSI there no such include in geant4Cint.cxx at all! Don't ask me why, I don't know. May be because the different flavour of Linux (I am using SUSE10.0 by the way). As result everything is compiling without a problem.
So we have to complain about this problem to the VMC team. If you agree I will report to the VMC mailing list.
P.S. After changing TCollectionProxy.h to TCollectionProxyFactory.h in the geant4Cint.cxx header, VMC is compiles without a problem.
Best regards,
Andrey
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| Re: New release of external packages [message #5246 is a reply to message #5196] |
Thu, 18 October 2007 11:51 |
StefanoSpataro
Messages: 2736
Registered: June 2005
Location: Torino
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first-grade participant |
From: *physik.uni-giessen.de
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Hello,
after installing successfully the new external packages and PandRoot I run the sim_emc.C without any problems.
I changed the transport model, I switched on TGeant4, and then I have the following error since almost the beginning:
### Run 0 start.
-I CbmPrimaryGenerator: 1 primary tracks from vertex (0, 0, 0)
>>> Event 0
>>> End of Event 0
-I CbmPrimaryGenerator: 1 primary tracks from vertex (0, 0, 0)
>>> Event 1
>>> End of Event 1
-I CbmPrimaryGenerator: 1 primary tracks from vertex (0, 0, 0)
>>> Event 2
*** Break *** floating point exception
Using host libthread_db library "/lib/libthread_db.so.1".
Attaching to program: /proc/14070/exe, process 14070
`system-supplied DSO at 0xffffe000' has disappeared; keeping its symbols.
[Thread debugging using libthread_db enabled]
[New Thread -1223894848 (LWP 14070)]
0xffffe410 in __kernel_vsyscall ()
#1 0xb7187a03 in waitpid () from /lib/libc.so.6
#2 0xb7132569 in strtold_l () from /lib/libc.so.6
#3 0xb722836d in system () from /lib/libpthread.so.0
#4 0xb7ae7d2d in TUnixSystem::Exec () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#5 0xb7aec467 in TUnixSystem::StackTrace () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#6 0xb7aebdff in TUnixSystem::DispatchSignals () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#7 0xb7aebf2d in SigHandler () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#8 0xb7ae50b0 in sighandler () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#9 <signal handler called>
#10 0xb15ebe3a in G4VProcess::AtRestGPIL (this=0xd026a28, track=@0xdb8f928, condition=0xac729a0) at G4VProcess.hh:421
#11 0xb15eb59b in G4SteppingManager::InvokeAtRestDoItProcs (this=0xac728a0) at G4SteppingManager2.cc:287
#12 0xb15e6e55 in G4SteppingManager::Stepping (this=0xac728a0) at G4SteppingManager.cc:159
#13 0xb15f5593 in G4TrackingManager::ProcessOneTrack (this=0xac72878, apValueG4Track=0xdb8f928) at G4TrackingManager.cc:126
#14 0xb1517354 in G4EventManager::DoProcessing (this=0xac72830, anEvent=0xac7f470) at G4EventManager.cc:185
#15 0xb1517ae8 in G4EventManager::ProcessOneEvent (this=0xac72830, anEvent=0xac7f470) at G4EventManager.cc:335
#16 0xb14bafd1 in G4RunManager::DoEventLoop (this=0xac72770, n_event=1000, macroFile=0x0, n_select=-1) at G4RunManager.cc:234
#17 0xb14b966d in G4RunManager::BeamOn (this=0xac72770, n_event=1000, macroFile=0x0, n_select=-1) at G4RunManager.cc:139
#18 0xb0ae6096 in TG4RunManager::ProcessRun () from /d/c0/cbmsoft/cbmsoft_devel/transport/geant4_vmc/lib/tgt_linux/libgeant4 vmc.so
#19 0xb0aeab37 in TGeant4::ProcessRun () from /d/c0/cbmsoft/cbmsoft_devel/transport/geant4_vmc/lib/tgt_linux/libgeant4 vmc.so
#20 0xb34bcb5d in CbmMCApplication::RunMC (this=0x85d2c38, nofEvents=1000) at /home/spataro/dev/pandaroot/base/CbmMCApplication.cxx:193
#21 0xb34cc2cb in CbmRunSim::Run (this=0x856a4c8, NStart=1000, NStop=0) at /home/spataro/dev/pandaroot/base/CbmRunSim.cxx:141
#22 0xb34ff1e1 in G__CbmDict_519_0_5 (result7=0xbfe7887c, funcname=0x8569088 "\001", libp=0xbfe724b4, hash=0) at /home/spataro/dev/cmake/base/CbmDict.cxx:8229
#23 0xb73dd52a in Cint::G__ExceptionWrapper () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#24 0xb74aad57 in G__call_cppfunc () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#25 0xb7488656 in G__interpret_func () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#26 0xb74795e1 in G__getfunction () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#27 0xb7537e5e in G__getstructmem () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#28 0xb752f9ec in G__getvariable () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#29 0xb745a2ed in G__getitem () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#30 0xb745f76b in G__getexpr () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#31 0xb74cd842 in G__exec_function () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#32 0xb74d18dc in G__exec_statement () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#33 0xb744625b in G__exec_tempfile_core () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#34 0xb74464bf in G__exec_tempfile () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#35 0xb74decfb in G__process_cmd () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCint.so.5.16
#36 0xb7abf63f in TCint::ProcessLine () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#37 0xb7abae4a in TCint::ProcessLineSynch () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#38 0xb7a2d381 in TApplication::ProcessFile () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#39 0xb7a2af56 in TApplication::ProcessLine () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libCore.so.5.16
#40 0xb738044d in TRint::Run () from /d/c0/cbmsoft/cbmsoft_devel/tools/root/lib/libRint.so.5.16
#41 0x08048e2b in main ()
Do we have some clues on this, or am I the only one suffering from this error?
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| Re: New release of external packages [message #5251 is a reply to message #5196] |
Thu, 18 October 2007 15:28 |
Tobias Stockmanns
Messages: 489
Registered: May 2007
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first-grade participant |
From: *ikp.kfa-juelich.de
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I am running in similar problems with the runMvdSim.C macro. With DPM generator and the box generator the macro crashes after a view events with the following error:
*** Break *** floating point exception
Using host libthread_db library "/lib/tls/libthread_db.so.1".
Attaching to program: /proc/21926/exe, process 21926
`system-supplied DSO at 0xffffe000' has disappeared; keeping its symbols.
[Thread debugging using libthread_db enabled]
[New Thread 1089003968 (LWP 21926)]
0xffffe410 in __kernel_vsyscall ()
#1 0x40dc70a3 in __waitpid_nocancel () from /lib/tls/libc.so.6
#2 0x40d6fcb9 in do_system () from /lib/tls/libc.so.6
#3 0x40d347ad in system () from /lib/tls/libpthread.so.0
#4 0x401cb02c in TUnixSystem::Exec ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#5 0x401d2b24 in TUnixSystem::StackTrace ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#6 0x401d1374 in TUnixSystem::DispatchSignals ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#7 0x401d14b9 in SigHandler ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#8 0x401cbda1 in sighandler ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#9 <signal handler called>
#10 0x47aa2145 in G4VProcess::AtRestGPIL (this=0x9e59398, track=@0xa5f3908,
condition=0x9c0d6c0) at G4VProcess.hh:421
#11 0x47aa0386 in G4SteppingManager::InvokeAtRestDoItProcs (this=0x9c0d5c0)
at G4SteppingManager2.cc:287
#12 0x47a99c72 in G4SteppingManager::Stepping (this=0x9c0d5c0)
at G4SteppingManager.cc:159
#13 0x47aad2fe in G4TrackingManager::ProcessOneTrack (this=0x9c0d598,
apValueG4Track=0xa5f3908) at G4TrackingManager.cc:126
#14 0x47b83c1b in G4EventManager::DoProcessing (this=0x9c0d550,
anEvent=0x9c1a3a0) at G4EventManager.cc:185
#15 0x47b843fd in G4EventManager::ProcessOneEvent (this=0x9c0d550,
anEvent=0x9c1a3a0) at G4EventManager.cc:335
#16 0x47c47d34 in G4RunManager::DoEventLoop (this=0x9c0d490, n_event=100,
macroFile=0x0, n_select=-1) at G4RunManager.cc:234
#17 0x47c45146 in G4RunManager::BeamOn (this=0x9c0d490, n_event=100,
macroFile=0x0, n_select=-1) at G4RunManager.cc:139
#18 0x48834605 in TG4RunManager::ProcessRun ()
from /home/stockman/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/libge ant4vmc.so
#19 0x48838e43 in TGeant4::ProcessRun ()
from /home/stockman/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/libge ant4vmc.so
#20 0x4511b19d in CbmMCApplication::RunMC (this=0x8596b20, nofEvents=100)
at /home/stockman/fairroot/cbmsoft/pandaroot/base/CbmMCApplication.cxx:231
#21 0x4512e4af in CbmRunSim::Run (this=0x853dd60, NStart=100, NStop=0)
at /home/stockman/fairroot/cbmsoft/pandaroot/base/CbmRunSim.cxx:130
#22 0x4514e7ed in G__CbmDict_641_0_5 (result7=0xbfb61e1c,
funcname=0x853ca00 "\001", libp=0xbfb5ba78, hash=0)
at /home/stockman/fairroot/cbmsoft/cbuild/base/CbmDict.cxx:8214
#23 0x4068b9e9 in Cint::G__ExceptionWrapper ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#24 0x40745fb2 in G__call_cppfunc ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#25 0x40729463 in G__interpret_func ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#26 0x40719d49 in G__getfunction ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#27 0x407d4d6b in G__getstructmem ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#28 0x407ccfe7 in G__getvariable ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#29 0x406f97cb in G__getitem ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#30 0x406fabee in G__getexpr ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#31 0x4076a6eb in G__exec_function ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#32 0x4076f934 in G__exec_statement ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#33 0x406e540b in G__exec_tempfile_core ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#34 0x406e5694 in G__exec_tempfile ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#35 0x4077c39e in G__process_cmd ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#36 0x401a55be in TCint::ProcessLine ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#37 0x401a2242 in TCint::ProcessLineSynch ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#38 0x40119930 in TApplication::ProcessFile ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#39 0x40117f64 in TApplication::ProcessLine ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#40 0x40bd27ff in TRint::Run ()
from /home/stockman/fairroot/cbmsoft/tools/root/lib/libRint.so.5.16
#41 0x08048d93 in main ()
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| Re: New release of external packages [message #5255 is a reply to message #5254] |
Thu, 18 October 2007 18:26 |
asanchez
Messages: 350
Registered: March 2006
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first-grade participant |
From: *kph.uni-mainz.de
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Hi Tobias
I have trying to run all the detectors
one by one, to see if a i get some error message,
and when i run the mvd i get this one by using geant4.
I don't know exactly if its is the same as you get
but it seems something is still not working well
with the new packages. By running the drc detector
i get also errors.
I'm sursprised my detector runs.
cheers
Alicia.
>>> End of Event 2
-I CbmPrimaryGenerator: 10 primary tracks from vertex (0, 0, 0)
>>> Event 3
$$$ Primary track 10
*** Break *** floating point exception
Using host libthread_db library "/lib/libthread_db.so.1".
Attaching to program: /proc/32585/exe, process 32585
`system-supplied DSO at 0xffffe000' has disappeared; keeping its symbols.
done.
done.
[Thread debugging using libthread_db enabled]
[New Thread 16384 (LWP 32585)]
done.
done.
done.
done.
done.
done.
done.
done.
done.
0x40e85788 in waitpid () from /lib/libc.so.6
#1 0x40f0d8c0 in __DTOR_END__ () from /lib/libc.so.6
#2 0x40e1e442 in do_system () from /lib/libc.so.6
#3 0x40d98c5f in system () from /lib/libpthread.so.0
#4 0x40209fe9 in TUnixSystem::Exec (this=0x80cc000,
at unix/src/TUnixSystem.cxx:1803
#5 0x4020a49e in TUnixSystem::StackTrace (this=0x80cc000) at unix/src/TUnixSystem.cxx:1988
#6 0x402082fb in TUnixSystem::DispatchSignals (this=0x80cc000, sig=kSigFloatingException)
at unix/src/TUnixSystem.cxx:945
#7 0x40206590 in SigHandler (sig=kSigFloatingException) at unix/src/TUnixSystem.cxx:338
#8 0x4020d1bf in sighandler (sig=8) at unix/src/TUnixSystem.cxx:3178
#9 0x40d97825 in __pthread_sighandler () from /lib/libpthread.so.0
#10 <signal handler called>
#11 0x46f828a6 in G4VProcess::AtRestGPIL (this=0x9dfbcc0, track=@0xa6158f0, condition=0x9bcd8d8)
at G4VProcess.hh:421
#12 0x46f8128b in G4SteppingManager::InvokeAtRestDoItProcs (this=0x9bcd7d8) at src/G4SteppingManager2.cc:284
#13 0x46f8570a in G4SteppingManager::Stepping (this=0x9bcd7d8) at src/G4SteppingManager.cc:159
#14 0x46f8f0e5 in G4TrackingManager::ProcessOneTrack (this=0x9bcd770, apValueG4Track=0xa6158f0)
at src/G4TrackingManager.cc:126
#15 0x4702df04 in G4EventManager::DoProcessing (this=0x9bcd728, anEvent=0x9bd7b48) at src/G4EventManager.cc:185
#16 0x4702e71e in G4EventManager::ProcessOneEvent (this=0x9bcd728, anEvent=0x9bd7b48)
at src/G4EventManager.cc:335
#17 0x470cc242 in G4RunManager::DoEventLoop (this=0x9bcd658, n_event=100, macroFile=0x0, n_select=-1)
at src/G4RunManager.cc:234
#18 0x470cbb87 in G4RunManager::BeamOn (this=0x9bcd658, n_event=100, macroFile=0x0, n_select=-1)
at src/G4RunManager.cc:139
#19 0x47a5723b in TG4RunManager::ProcessRun ()
from /misc/cbmsoft/Debian3.1/development/transport/geant4_vmc/lib/tgt_linux/l ibgeant4vmc.so
#20 0x47a5e179 in TGeant4::ProcessRun ()
from /misc/cbmsoft/Debian3.1/development/transport/geant4_vmc/lib/tgt_linux/l ibgeant4vmc.so
#21 0x44e2b4c2 in CbmMCApplication::RunMC (this=0x854ebf0, nofEvents=100)
at /d/panda02/asanchez/fairroot_new/pandaroot/base/CbmMCApplication.cxx:193
#22 0x44e3cb7f in CbmRunSim::Run (this=0x84f10b8, NStart=100, NStop=0)
at /d/panda02/asanchez/fairroot_new/pandaroot/base/CbmRunSim.cxx:141
#23 0x44e675de in G__CbmDict_519_0_5 (result7=0xbff63880, funcname=0x84efc78 "\001", libp=0xbff5daa0, hash=0)
at /d/panda02/asanchez/fairroot_new/build/base/CbmDict.cxx:8229
#24 0x407913d6 in Cint::G__ExceptionWrapper (funcp=0x44e6746e <G__CbmDict_519_0_5>, result7=0xbff63880,
funcname=0x84efc78 "\001", libp=0xbff5daa0, hash=0) at cint/src/Api.cxx:362
#25 0x40877620 in G__call_cppfunc (result7=0xbff63880, libp=0xbff5daa0, ifunc=0x84efc78, ifn=0)
at cint/src/v6_newlink.cxx:512
#26 0x4085bf43 in G__interpret_func (result7=0xbff63880, funcname=0xbff63480 "Run", libp=0xbff5daa0, hash=309,
p_ifunc=0x84efc78, funcmatch=1, memfunc_flag=1) at cint/src/v6_ifunc.cxx:5181
#27 0x4083d91f in G__getfunction (item=0xbff66446 "Run(nEvents)", known3=0xbff65c8c, memfunc_flag=1)
at cint/src/v6_func.cxx:2611
#28 0x40915a28 in G__getstructmem (store_var_type=112,
varname=0xbff65960 "basiclibs3�{3�@3�@3�|3�@3�", membername=0xbff66446 "Run(nEvents)",
tagname=0xbff641c0 "fRun", known2=0xbff65c8c, varglobal=0x4099ee60, objptr=2) at cint/src/v6_var.cxx:4284
#29 0x40909931 in G__getvariable (item=0xbff66440 "fRun->Run(nEvents)", known2=0xbff65c8c,
varglobal=0x4099ee60, varlocal=0x0) at cint/src/v6_var.cxx:3129
#30 0x4082f8bf in G__getitem (item=0xbff66440 "fRun->Run(nEvents)") at cint/src/v6_expr.cxx:1830
#31 0x4082d55a in G__getexpr (expression=0xbff67ab0 "fRun->Run(nEvents)") at cint/src/v6_expr.cxx:1316
#32 0x4089c025 in G__exec_function (statement=0xbff67ab0 "fRun->Run(nEvents)", pc=0xbff67aac, piout=0xbff67aa0,
plargestep=0xbff67a90, presult=0xbff67eb0) at cint/src/v6_parse.cxx:457
#33 0x408a839e in G__exec_statement () at cint/src/v6_parse.cxx:4237
#34 0x408071ee in G__exec_tempfile_core (
file=0xbff70e90 "/d/panda02/asanchez/fairroot_new/pandaroot/macro/mvd/./runMvdSim.C", fp=0x0)
at cint/src/v6_debug.cxx:358
#35 0x408075c9 in G__exec_tempfile (
file=0xbff70e90 "/d/panda02/asanchez/fairroot_new/pandaroot/macro/mvd/./runMvdSim.C")
at cint/src/v6_debug.cxx:433
#36 0x408b3c40 in G__process_cmd (line=0x406bf94d "97", prompt=0x80cf5bc "", more=0x80cf5b4, err=0xbff716fc,
rslt=0xbff71700) at cint/src/v6_pause.cxx:3240
#37 0x401d252e in TCint::ProcessLine (this=0x80cf598, line=0x406bf94d "97", error=0xbff73f54)
at meta/src/TCint.cxx:289
#38 0x401d26e3 in TCint::ProcessLineSynch (this=0x80cf598, line=0x406bf94d "97", error=0xbff73f54)
at meta/src/TCint.cxx:323
#39 0x4012c08e in TApplication::ProcessFile (this=0x80ffee8, name=0xbff71e53 "runMvdSim.C", error=0xbff73f54)
at base/src/TApplication.cxx:872
#40 0x4012b88d in TApplication::ProcessLine (this=0x80ffee8, line=0xbff71e50 ".x runMvdSim.C", sync=false,
err=0xbff73f54) at base/src/TApplication.cxx:744
#41 0x40d25704 in TRint::Run (this=0x80ffee8, retrn=false) at rint/src/TRint.cxx:338
#42 0x08048ebe in main (argc=1, argv=0xbff74014) at main/src/rmain.cxx:29
Root >
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| Re: New release of external packages [message #5259 is a reply to message #5257] |
Fri, 19 October 2007 09:28 |
Mohammad Al-Turany
Messages: 518
Registered: April 2004
Location: GSI, Germany
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first-grade participant |
From: *gsi.de
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Hallo Tobias,
First I thought it crash when using the geometry but now I see it better (after some coffee!). Yes this problem we have seen in the dtor of the TGeo, In cbmroot for example it happens only if the ÉCAL is used, other wise not and we are trying to understand this, just give us a few days!
regards
Mohammad
[Updated on: Fri, 19 October 2007 09:37] Report message to a moderator |
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| Re: New release of external packages [message #5267 is a reply to message #5266] |
Fri, 19 October 2007 12:01 |
Johan Messchendorp
Messages: 693
Registered: April 2007
Location: University of Groningen
|
first-grade participant |
From: *xs4all.nl
|
|
Hi Alicia,
With the new external packages, the Geant3 running mode should be as fine as with the older external packages, however, including the Geane updates (correct me if I am wrong Mohammad). So, in that sense it is a step forward in making Geane available and letting other tracking developers exploit it as well. As far as I can see, the main problems are related to the use of the geant4 engine with the new external packages. Partly, - as far as I understand it now - it comes from the PandaRoot side, which we have to fix anyway for the next stable version. Furthermore, the installation has caused some headaches for some of us (I am really feeling sorry for Stefano), than what we expected a priori.
Johan.
Johan Messchendorp
University of Groningen/KVI
Zernikelaan 25
NL-9747 AA Groningen
The Netherlands
tel. +31-503633558
fax +31-503634003
[Updated on: Fri, 19 October 2007 12:02] Report message to a moderator |
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| Re: New release of external packages [message #5271 is a reply to message #5258] |
Fri, 19 October 2007 18:21 |
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Anonymous Poster
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From: *ikp.kfa-juelich.de
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Hello Mohammad,
| Mohammad Al-Turany wrote on Fri, 19 October 2007 09:23 |
Hallo Johan,
vmc 2.4 is still not released (no tar file) but you can get it from SVN,
svn co https://root.cern.ch/svn/geant4_vmc/trunk geant4_vmc
if you replace your vmc2.3 with this one, you will need also to modify the gconfig/g4Config.C file and the directory pandaroot/cbmg4 too. and the changes are not backward compatible with the vmc 2.3!
So should we switch to the new one? now or only for release 2 what do you think?
regards
Mohammad
|
I have installed vmc 2.4 in addition to vmc 2.3.
What modification has to be done in gconfig/g4Config.C and cbmg4?
Andrey
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| Re: New release of external packages [message #5280 is a reply to message #5272] |
Mon, 22 October 2007 11:58 |
|
Anonymous Poster
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|
From: *ikp.kfa-juelich.de
|
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Hello Mohammad,
I have compiled my PandaRoot installation as you told. It compiles without a problem, but when I run runMvdSim.C macro I saw the following error message:
Running TVirtualMCApplication::ConstructGeometry
*************************************************************
Geant4 version Name: geant4-09-00 (29-June-2007)
Copyright : Geant4 Collaboration
Reference : NIM A 506 (2003), 250-303
WWW : http://cern.ch/geant4
*************************************************************
Info in <TG4RootNavMgr::Initialize>: Creating G4 hierarchy ...
Info in <TGeoManager::ConvertReflections>: Converting reflections in: CBMGeom - CBM geometry ...
Info in <TGeoManager::ConvertReflections>: Done
--- Warning from G4Material::G4Material() define a material with density=0 is not allowed.
The material vacuum will be constructed with the default minimal density: 1e-25g/cm3
===> GEANT4 materials created and mapped to TGeo ones...
===> GEANT4 physical volumes created and mapped to TGeo hierarchy...
### INFO: TG4RootDetectorConstruction::Construct() finished
TG4PostDetConstruction::Initialize
G4 Stat: instantiated 126 logical volumes
328 physical volumes
Info in <TG4RootNavMgr::ConnectToG4>: ROOT detector construction class connected to G4RunManager
Adding HadronPhysicsList LHEP_BERT
<<< Geant4 Physics List engine packaging library: PACK 5.3
<<< Geant4 Physics List simulation engine: LHEP_BERT 3.2
/home/sokolov/fairroot/cbmsoft/tools/root/bin/root.exe: symbol lookup error: /home/sokolov/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/libgea nt4vmc.so: undefined symbol: _ZN19G4EmStandardPhysicsC1EiRK8G4String
In principle it is VMC related problem. May be you have some idea what's wrong?
Best regards,
Andrey
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| Re: New release of external packages [message #5288 is a reply to message #5281] |
Mon, 22 October 2007 15:37 |
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Anonymous Poster
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From: *ikp.kfa-juelich.de
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Thanks,
it solved the problem with the libgeant4vmc.so library, but again when I run the runMvdSim.C macro I see the same problem as Tobias seen (with the geant4_vmc_2.3), namely:
### Run 0 start.
-I CbmPrimaryGenerator: 10 primary tracks from vertex (0, 0, 0)
>>> Event 0
*** Break *** floating point exception
Using host libthread_db library "/lib/tls/libthread_db.so.1".
Attaching to program: /proc/10638/exe, process 10638
`system-supplied DSO at 0xffffe000' has disappeared; keeping its symbols.
[Thread debugging using libthread_db enabled]
[New Thread 1089003968 (LWP 10638)]
0xffffe410 in __kernel_vsyscall ()
#1 0x40dc70a3 in __waitpid_nocancel () from /lib/tls/libc.so.6
#2 0x40d6fcb9 in do_system () from /lib/tls/libc.so.6
#3 0x40d347ad in system () from /lib/tls/libpthread.so.0
#4 0x401cb02c in TUnixSystem::Exec () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#5 0x401d2b24 in TUnixSystem::StackTrace () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#6 0x401d1374 in TUnixSystem::DispatchSignals () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#7 0x401d14b9 in SigHandler () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#8 0x401cbda1 in sighandler () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#9 <signal handler called>
#10 0x480ea8c2 in TG4VSpecialCuts::PostStepGetPhysicalInteractionLength ()
from /home/sokolov/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/libgea nt4vmc.so
#11 0x4728e180 in G4VProcess::PostStepGPIL (this=0x9e66f80, track=@0xa5b65b8, previousStepSize=0, condition=0x9c058e0)
at G4VProcess.hh:429
#12 0x4728b21c in G4SteppingManager::DefinePhysicalStepLength (this=0x9c057e0) at G4SteppingManager2.cc:165
#13 0x47285cf1 in G4SteppingManager::Stepping (this=0x9c057e0) at G4SteppingManager.cc:180
#14 0x472992fe in G4TrackingManager::ProcessOneTrack (this=0x9c057b8, apValueG4Track=0xa5b65b8) at G4TrackingManager.cc:126
#15 0x4736fc1b in G4EventManager::DoProcessing (this=0x9c05770, anEvent=0x9c125d8) at G4EventManager.cc:185
#16 0x473703fd in G4EventManager::ProcessOneEvent (this=0x9c05770, anEvent=0x9c125d8) at G4EventManager.cc:335
#17 0x47433d34 in G4RunManager::DoEventLoop (this=0x9c056b0, n_event=10000, macroFile=0x0, n_select=-1)
at G4RunManager.cc:234
#18 0x47431146 in G4RunManager::BeamOn (this=0x9c056b0, n_event=10000, macroFile=0x0, n_select=-1) at G4RunManager.cc:139
#19 0x4812b665 in TG4RunManager::ProcessRun ()
from /home/sokolov/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/libgea nt4vmc.so
#20 0x4812fe93 in TGeant4::ProcessRun ()
from /home/sokolov/fairroot/cbmsoft/transport/geant4_vmc/lib/tgt_linux/libgea nt4vmc.so
#21 0x44941f95 in CbmMCApplication::RunMC (this=0x8586ad0, nofEvents=10000)
at /home/sokolov/fairroot/cbmsoft/pandaroot/base/CbmMCApplication.cxx:193
#22 0x44955379 in CbmRunSim::Run (this=0x85247e0, NStart=10000, NStop=0)
at /home/sokolov/fairroot/cbmsoft/pandaroot/base/CbmRunSim.cxx:141
#23 0x449755df in G__CbmDict_519_0_5 (result7=0xbfd7b17c, funcname=0x85233b0 "\001", libp=0xbfd74dd8, hash=0)
at /home/sokolov/fairroot/cbmsoft/cbuild/base/CbmDict.cxx:8229
#24 0x4068b9e9 in Cint::G__ExceptionWrapper () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#25 0x40745fb2 in G__call_cppfunc () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#26 0x40729463 in G__interpret_func () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#27 0x40719d49 in G__getfunction () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#28 0x407d4d6b in G__getstructmem () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#29 0x407ccfe7 in G__getvariable () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#30 0x406f97cb in G__getitem () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#31 0x406fabee in G__getexpr () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#32 0x4076a6eb in G__exec_function () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#33 0x4076f934 in G__exec_statement () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#34 0x406e540b in G__exec_tempfile_core () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#35 0x406e5694 in G__exec_tempfile () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#36 0x4077c39e in G__process_cmd () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCint.so.5.16
#37 0x401a55be in TCint::ProcessLine () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#38 0x401a2242 in TCint::ProcessLineSynch () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#39 0x40119930 in TApplication::ProcessFile () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#40 0x40117f64 in TApplication::ProcessLine () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#41 0x40bd21a5 in TRint::HandleTermInput () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libRint.so.5.16
#42 0x40bd17b4 in TTermInputHandler::Notify () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libRint.so.5.16
#43 0x40bd3942 in TTermInputHandler::ReadNotify () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libRint.so.5.16
#44 0x401d163e in TUnixSystem::CheckDescriptors () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#45 0x401d1d70 in TUnixSystem::DispatchOneEvent () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#46 0x40169a5c in TSystem::InnerLoop () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#47 0x401699ec in TSystem::Run () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#48 0x40116db4 in TApplication::Run () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libCore.so.5.16
#49 0x40bd2948 in TRint::Run () from /home/sokolov/fairroot/cbmsoft/tools/root/lib/libRint.so.5.16
#50 0x08048d93 in main ()
Root >
Best regards,
Andrey
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