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Job Submission on Kronos [message #22537]

Wed, 25 April 2018 09:44

Waleed Esmail
Messages: 9
Registered: March 2018

occasional visitor

From: *unitymedia.biz

Dear experts,

I have a problem in submitting jobs to kronos. I followed the instructions explained in
https://panda-wiki.gsi.de/foswiki/bin/view/Computing/PandaRootSimulation Kronos

with FairSoft, and FairRoot

SIMPATH=/cvmfs/fairroot.gsi.de/fairsoft/may16_root6/
FAIRROOTPATH=/cvmfs/fairroot.gsi.de/fairroot/v-16.06b_fairsoft-may16_root6/

and PandaRoot dec17.

When I tried to submit a job with one of the examples explained like:

sbatch -a1-20 jobsim_kronos.sh singleK 1000 "box:type[321,1]:p[0.05,8]:tht[0,180]:phi[0,360]" 12.

it prints

Submitted batch job XXXXXXXX

and when immediately check the submitted job by

squeue -u wesmail

I find no submitted jobs

JOBID PARTITION     NAME     USER ST       TIME  NODES NODELIST(REASON)

What is going on?!.

Thank you very much for your help
Waleed

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Re: Job Submission on Kronos [message #22540 is a reply to message #22537]

Wed, 25 April 2018 09:56

Klaus Götzen
Messages: 293
Registered: June 2006
Location: GSI

first-grade participant

From: *gsi.de

Hi Waleed,

I just tried to submit as you did in my installation, and it worked.

I believe you need a permission to submit jobs to the cluster - do you know whether you have one (or asked for one)?

You also need to have a data/slurmlog/ directory, or the one which is stated as log-directory in the job submission script. If slurm doesn't find the directory, it immediately kills the job I guess. Can you inspect the slurm log files?

Best regards,
Klaus

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Re: Job Submission on Kronos [message #22542 is a reply to message #22537]

Wed, 25 April 2018 10:10

Waleed Esmail
Messages: 9
Registered: March 2018

occasional visitor

From: *unitymedia.biz

Hello Klaus,

thank you for your instant reply. Yes, the problem was in the data/slurmlog/ directory. The data/ directory was there but empty, when I created slurmlog/ inside it the job submitted and completed and I found the simulated file inside data/.

Thank you very much for your help Smile

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