For me it seems that you have a problem with the CUDA installation of the PndSttCellTrackFinder.
This part of the code is not realy needed and one could try to just comment the compilation out.
Therefore you have to modify the tracking/SttCellTrackFinder/CMakeLists.txt file.
Comment out lines 35,36,37 (adding the CUDA directory to the build process) and
line 97.
I cannot check this patch because I do not have a NVIDIA graphics card in my system, but I hope that it works.