GSI Forum
GSI Helmholtzzentrum für Schwerionenforschung

Home » PANDA » PandaRoot » Bugs, Fixes, Releases » Install PandaRoot dec17 on Kronos
Re: Install PandaRoot dec17 on Kronos [message #22188 is a reply to message #22170] Wed, 14 February 2018 09:28 Go to previous messageGo to previous message
Iman Keshk is currently offline  Iman Keshk
Messages: 12
Registered: February 2018
occasional visitor
From: *ep1.ruhr-uni-bochum.de
Hi Tobias,

I am now using FairRoot v-17.10b_fairsoft-oct17p1 and FairSoft may16_root6. When I submit jobs with jobsim_kronos.sh, I get the same error as Jennifer Pütz here https://forum.gsi.de/index.php?t=tree&th=5790&start=0&rid=0 .
I followed Ralfs instructions but nothing changed, so that I changed to FairRoot v-16.06b_fairsoft-may16_root6 so that fairroot and fairsoft are matched. When I submit jobs with jobsim_kronos.sh I get a segmentation fault when running the pid file in the end. In pid.log:


The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
===========================================================
#6 0x00007f91df5fb4be in PndMCTrack::GetPdgCode (this=0x0) at /lustre/nyx/panda/ikeshk/pandaroot/dec17/pnddata/PndMCTrack.h:73
#7 0x00007f91e666cd13 in PndIdealTrackFinder::CreateTracks (this=0x60a82f0) at /lustre/nyx/panda/ikeshk/pandaroot/dec17/PndTrackers/PndIdealTrackFin
der/PndIdealTrackFinder.cxx:187
#8 0x00007f91e666be45 in PndIdealTrackFinder::Exec (this=0x60a82f0) at /lustre/nyx/panda/ikeshk/pandaroot/dec17/PndTrackers/PndIdealTrackFinder /PndI
dealTrackFinder.cxx:98
#9 0x00007f91e6ecf43b in FairTask::ExecuteTasks (this=0x391fec0, option=0x7f91e6f399ec "") at /home/uhlig/fairroot/source/v-16.06/base/steer/FairTas
k.cxx:209
#10 0x00007f91e6ecf47a in FairTask::ExecuteTasks (this=0x5c478a0, option=0x7f91e6f399ec "") at /home/uhlig/fairroot/source/v-16.06/base/steer/FairTas
k.cxx:213
#11 0x00007f91e6ecef91 in FairTask::ExecuteTask (this=0x5c478a0, option=0x7f91e6f399ec "") at /home/uhlig/fairroot/source/v-16.06/base/steer/FairTask
.cxx:173
#12 0x00007f91e6ec1e3f in FairRunAna::Run (this=0x5cb40d0, Ev_start=<optimized out>, Ev_end=10) at /home/uhlig/fairroot/source/v-16.06/base/steer/Fai
rRunAna.cxx:375
#13 0x00007f91f3da2371 in ?? ()
#14 0x0000000001a64210 in ?? ()
#15 0x0000000001a642c0 in ?? ()
#16 0x00007f91f338d660 in ?? () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
#17 0x0000000001a642f8 in ?? ()
#18 0x00007f91f338d678 in std::string::_Rep::_S_empty_rep_storage () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
#19 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#20 0x7079685f646c6f12 in ?? ()
#21 0x000000000100315f in ?? ()
#22 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#23 0x7261702e6c6c610e in ?? ()
#24 0x00007f91f3da3000 in ?? ()
#25 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#26 0x0000000064697006 in ?? ()
#27 0x0000000000000024 in ?? ()
#28 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#29 0x0000796d6d75640a in ?? ()
#30 0x0000000005d02558 in ?? ()
#31 0x0000000005cb40d0 in ?? ()
#32 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#33 0x00007f91f2620000 in malloc () from /lib/x86_64-linux-gnu/libc.so.6
#34 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#35 0x0000000064697006 in ?? ()
#36 0x0000000000000024 in ?? ()
#37 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#38 0x7261702e6c6c610e in ?? ()
#39 0x00007f91f3da3000 in ?? ()
#40 0x0000000000000009 in ?? ()
#41 0x00007ffc69bc2a60 in ?? ()
#42 0x00007ffc69bc2a60 in ?? ()
#43 0x0000000001a5f310 in ?? ()
#44 0x00007ffc69bc24e8 in ?? ()
#45 0x00007ffc69bc2520 in ?? ()
#46 0x00007f91f3da204d in ?? ()
#47 0x0000000003274dd8 in ?? ()
#48 0x0000000005c633f0 in ?? ()
#49 0x0000000000000001 in ?? ()
#50 0x00007f91f391a890 in vtable for TString () from /cvmfs/fairroot.gsi.de/fairsoft/may16_root6/lib/root/libCore.so.6
#51 0x7079685f646c6f12 in ?? ()
#52 0x000000000100315f in ?? ()
#53 0x00007ffc69bc2a60 in ?? ()
#54 0x0000000001a620b0 in ?? ()
#55 0x0000000001b7bef8 in ?? ()
#56 0x0000000000000015 in ?? ()
#57 0x00007ffc69bc2590 in ?? ()
#58 0x00007f91efcdbc98 in executeWrapper (returnValue=0x7f91f3598930 <TString::TString(TString const&)>, function=..., this=0x6) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /Interpreter/IncrementalExecutor.h:186
#59 cling::Interpreter::RunFunction (this=<optimized out>, FD=<optimized out>, res=0x7f91f3598930 <TString::TString(TString const&)>) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /Interpreter/Interpreter.cpp:759
#60 0x00007f91efce1f6e in cling::Interpreter::EvaluateInternal (this=0x1a5f310, input="prod_aod("old_hyp_1") /* invoking function corresponding to '.x' */", CO=..., V=V
entry=0x7ffc69bc2a60, T=T
entry=0x0) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /Interpreter/Interpreter.cpp:1025
#61 0x00007f91efce21af in cling::Interpreter::echo (this=<optimized out>, input="prod_aod("old_hyp_1") /* invoking function corresponding to '.x' */", V=V
entry=0x7ffc69bc2a60) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /Interpreter/Interpreter.cpp:626
#62 0x00007f91efd863b9 in cling::MetaSema::actOnxCommand (this=0x1adc5b0, file=..., args=..., result=result
entry=0x7ffc69bc2a60) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /MetaProcessor/MetaSema.cpp:125
#63 0x00007f91efd91a59 in cling::MetaParser::isXCommand (this=this
entry=0x1d6e670, actionResult=
0x7ffc69bc288c: cling::MetaSema::AR_Success, resultValue=resultValue
entry=0x7ffc69bc2a60) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /MetaProcessor/MetaParser.cpp:272
#64 0x00007f91efd92aee in cling::MetaParser::isCommand (this=0x1d6e670, actionResult=
0x7ffc69bc288c: cling::MetaSema::AR_Success, resultValue=0x7ffc69bc2a60) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /MetaProcessor/MetaParser.cpp:124
#65 0x00007f91efd7ffb3 in cling::MetaProcessor::process (this=0x2865010, input_text=0x2f84d90 ".X /lustre/nyx/panda/ikeshk/pandaroot/dec17/macro/prod/prod_aod.C("old_hyp_1 ")", compRes=
0x7ffc69bc297c: cling::Interpreter::kSuccess, result=result
entry=0x7ffc69bc2a60) at /home/uhlig/fairsoft/source/may16_root6/tools/root/interpreter/cling/lib /MetaProcessor/MetaProcessor.cpp:149
===========================================================


*** Error in `/cvmfs/fairroot.gsi.de/fairsoft/may16_root6/bin/root.exe': double free or corruption (!prev): 0x00000000077ec600 ***
Generated Events = 10


What am I doing wrong and how can I solve this problem? I hope you can help me out.
Thank you
Iman

 
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Read Message
Previous Topic: New Release dec17
Next Topic: Installing dec17 with svn and git
Goto Forum:
  


Current Time: Wed Dec 04 20:36:47 CET 2024

Total time taken to generate the page: 0.00805 seconds