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[FIXED] External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19066&th=4822#msg_19066
*** Package gtest is OK ***
*** Package gsl is OK ***
*** Compiling Boost ................
The patch boost_glibc.patch is already applied.
Building Boost.Build engine with toolset gcc...
Failed to build Boost.Build build engine
Consult 'bootstrap.log' for more details
scripts/install_boost.sh: line 67: ./b2: No such file or directory
**** Checking libraries in /home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/lib ****
*** ERROR: Boost could not be created.
*** End installation of external packages with Errors***
Thanks and regards...
Debdeep]]>Dave2016-02-25T05:47:26-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19067&th=4822#msg_19067
the problem is that with the given information it is not possible to draw any conclusion.
Quote:
Building Boost.Build engine with toolset gcc...
Failed to build Boost.Build build engine
Consult 'bootstrap.log' for more details
Could you please attach the file bootstrap.log which should be in the directory basics/boost.
Ciao
Florian
]]>Florian Uhlig2016-02-25T07:45:40-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19068&th=4822#msg_19068
StefanoSpataro2016-02-25T07:59:31-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19069&th=4822#msg_19069
thanks and regards...]]>Dave2016-02-25T08:39:46-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19070&th=4822#msg_19070
I have to check that though I don't think there was a connection issue, because I tried to reinstall the packages and it gave the same error.
thanks and regards...]]>Dave2016-02-25T08:44:42-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19071&th=4822#msg_19071
I don't need the shell script. I need the log file bootstrap.log.
]]>Florian Uhlig2016-02-25T08:55:09-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19072&th=4822#msg_19072
StefanoSpataro2016-02-25T08:59:15-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19073&th=4822#msg_19073
yes, sorry for my mistake.
here is the log file.
thanks and regards...]]>Dave2016-02-25T09:00:51-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19074&th=4822#msg_19074
the only thing the log tells you
Quote:
/bootstrap.sh: 218: cd: can't cd to ./tools/build/v2/engine
I think something went wrong either with the download of the boost tar file or with the unpacking such that the required software is not present when you try to use it. I would propose to start from scratch with a new checkout of fairsoft and see if it works the second time.
]]>Florian Uhlig2016-02-25T09:14:55-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19075&th=4822#msg_19075
I tried to reinstall from the scratch, that previous issue is gone. Thanks again. But, now I have the following problem:
curl performs SSL certificate verification by default, using a "bundle"
of Certificate Authority (CA) public keys (CA certs). If the default
bundle file isn't adequate, you can specify an alternate file
using the --cacert option.
If this HTTPS server uses a certificate signed by a CA represented in
the bundle, the certificate verification probably failed due to a
problem with the certificate (it might be expired, or the name might
not match the domain name in the URL).
If you'd like to turn off curl's verification of the certificate, use
the -k (or --insecure) option.
*** Unpacking xerces-c-3.1.2.tar.gz ..............
--E-- Cannot unpack package xercesc
thanks and regards...]]>Dave2016-02-25T11:54:38-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19076&th=4822#msg_19076
Cheers,
Tobias
]]>Tobias Stockmanns2016-02-25T11:58:39-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19077&th=4822#msg_19077
thanks and regards...]]>Dave2016-02-25T12:16:39-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19078&th=4822#msg_19078
But this package is only needed when you install fairsoft with the python bindings which is something not needed for any of the fair experiments.
So please choose not to install the python binding for the time being.
What about your boost problem??
]]>Florian Uhlig2016-02-25T12:49:37-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19079&th=4822#msg_19079
]]>Florian Uhlig2016-02-25T13:35:48-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19080&th=4822#msg_19080
All right I will now try installing without the python binding. As I told you earlier the boost problem has gone during the re-installation.
thanks and regards...]]>Dave2016-02-25T13:55:11-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19081&th=4822#msg_19081
what about this error?
CMake Error: The source directory "/home/debdeep/Desktop/Panda/fairsoft_mar15/transport/geant4" does not appear to contain CMakeLists.txt.
Specify --help for usage, or press the help button on the CMake GUI.
make: *** No rule to make target `install'. Stop.
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4ABLA': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4EMLOW': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4ENSDFSTATE': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4NDL': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4NEUTRONXS': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4PII': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/G4SAIDDATA': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/PhotonEvaporation': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/RadioactiveDecay': No such file or directory
ln: failed to create symbolic link '/home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4/d ata/RealSurface': No such file or directory
scripts/install_geant4.sh: line 137: /home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/share/Geant4-10 .0.2/geant4make/geant4make.sh: No such file or directory
*** ERROR: geant4 could not be created.
*** End installation of external packages with Errors***
I checked three times and I didn't do any mistake following the wiki guide.
thanks and regards...]]>Dave2016-02-25T14:42:03-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19082&th=4822#msg_19082
Could you check the content of the directory
Quote:
]]>Florian Uhlig2016-02-25T14:54:38-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19083&th=4822#msg_19083
thanks and regards...]]>Dave2016-02-25T15:06:40-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19084&th=4822#msg_19084
]]>StefanoSpataro2016-02-25T15:20:20-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19095&th=4822#msg_19095
With a more stable and faster connection during the reinstallation I have overcome those previous problems. I have completed all the Fairsoft, Fairroot and Pandaroot parts. But at the very end as a last step as recommended in the guide I tried to check whether the PandaRoot installation went fine or not. For that after launching config.sh I ran the macro sim_complete.C inside root, but it crashes. The console gives some error message, like:
[ERROR ] init() PndEmcGeoPar not initialized
Error in <FairRuntimeDb::initContainers()>: Error occured during initialization
Error: Symbol TGeant3TGeo is not defined in current scope /home/debdeep/Desktop/Panda/fairsoft_mar15/pandaroot/gconfig/g3Config.C: 12:
Error: type TGeant3TGeo not defined FILE:/home/debdeep/Desktop/Panda/fairsoft_mar15/pandaroot/gconfig/g3Conf ig.C LINE:12
*** Interpreter error recovered ***
Error: illegal pointer to class object gMC 0x0 2736 /home/debdeep/Desktop/Panda/fairsoft_mar15/pandaroot/gconfig/SetCuts.C:2 3:
*** Interpreter error recovered ***
*** Break *** segmentation violation
===========================================================
There was a crash (#6 0xb719ef6b in SigHandler(ESignals) () from /home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/lib/root/libCor e.so.5.34).
Can anyone please have any idea or suggestion how to fix this issue?
AS I encountered the problem previously even, I checked find $SIMPATH -name libgeant321*, which shows: /home/debdeep/Desktop/Panda/fairsoft_mar15/buildFairSoft/lib/libgeant321 .so
My output of configure.sh is:
System during compilation: Ubuntu 14.04.2 LTS
i686
System now : Ubuntu 14.04.2 LTS
i686
thanks and regards...
]]>Dave2016-02-29T05:24:52-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19096&th=4822#msg_19096
I have seen this many times, each time there are problems in the geant3 installation. Maybe you could try to clean the transport/geant3 folder and configure again. I did the installation on a 14.04.2 two weeks ago without problems, then it is not a problem of the OS.
]]>StefanoSpataro2016-02-29T08:45:02-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19098&th=4822#msg_19098
Thanks. So, You meant to delete the geant3 folder and re-install the Fairsoft, fairroot and Pandaroot again? Is that correct? or Pandaroot has nothing to do with it?
regards...]]>Dave2016-02-29T11:46:37-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19099&th=4822#msg_19099
StefanoSpataro2016-02-29T11:47:49-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19100&th=4822#msg_19100
Dave2016-02-29T11:52:04-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19102&th=4822#msg_19102
It still gives the same result, i.e the crash! I launched configure.sh after deleting the geant3 folder and followed by the trial of the running of the macro sim_complete.C.
Here is the contained files inside geant3 folder and Tgeant3 subfolderfolder:
thanks and regards...]]>Dave2016-02-29T15:53:12-00:00Re: External package installation problem
https://forum.gsi.de/index.phpindex.php?t=rview&goto=19103&th=4822#msg_19103
StefanoSpataro2016-02-29T16:10:28-00:00